The Roslin Institute
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Dr Samantha Lycett

Highlighted Publications

Role for migratory wild birds in the global spread of avian influenza H5N8

Samantha Lycett, Lu Lu, Andrew Rambaut, Mark Woolhouse and 35 others Science Vol: 354 Pages: 213-217 14 Oct 2016

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Broadwick: A Framework for Computational Epidemiology

A. O'Hare, Samantha Lycett, Thomas Doherty, Liliana Salvaldor Monteiro Salvador, Rowland Kao BMC Bioinformatics 04 Feb 2016

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Supersize me: how whole-genome sequencing and big data are transforming epidemiology

Rowland Kao, Daniel T Haydon, Samantha J Lycett, Pablo R Murcia Trends in Microbiology Vol: 22 Pages: 282-91 May 2014

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Reassortment patterns of avian influenza virus internal segments among different subtypes

Lu Lu, Samantha J Lycett, Andrew J Leigh Brown BMC Evolutionary Biology Vol: 14 24 Jan 2014

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Automated analysis of phylogenetic clusters

Manon Ragonnet-Cronin, Emma Hodcroft, Stéphane Hué, Esther Fearnhill, Valerie Delpech, Andrew Leigh Brown, Samantha Lycett, UK HIV Drug Resistance Database BMC Bioinformatics Vol: 14 2013

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The genesis and source of the H7N9 influenza viruses causing human infections in China

Samantha J. Lycett, Andrew Rambaut and 28 others Nature Vol: 502 Pages: 241-244 10 Oct 2013

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Transmission Network Parameters Estimated From HIV Sequences for a Nationwide Epidemic

Andrew J Leigh Brown, Samantha J Lycett, Lucy Weinert, Gareth J Hughes, Esther Fearnhill, David T Dunn The Journal of Infectious Diseases Vol: 204 Pages: 1463-1469 Nov 2011

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Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic

Gavin J. D. Smith, Dhanasekaran Vijaykrishna, Justin Bahl, Samantha J. Lycett, Michael Worobey, Oliver G. Pybus, Siu Kit Ma, Chung Lam Cheung, Jayna Raghwani, Samir Bhatt, J. S. Malik Peiris, Yi Guan, Andrew Rambaut Nature Vol: 459 Pages: 1122-1125 25 Jun 2009

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