Andrew Sims

Senior Research Fellow - Bioinformatics

  • Cancer Research UK Edinburgh Centre
  • MRC Institute of Genetics & Molecular Medicine

Contact details

Address

Street

Cancer Research UK Edinburgh Centre
MRC Institute of Genetics & Molecular Medicine
The University of Edinburgh
Western General Hospital
Crewe Road South

City
Edinburgh
Post code
EH4 2XU

Availability

  • I do not work on Tuesdays (80% contract)

Background

Following graduation from the University of Edinburgh with a BSc.(Hon) in Biological Sciences, Andy worked as a Research Assistant at the British Antarctic Survey laboratories in Cambridge, characterizing the biodiversity of soil samples. He then worked as a Clinical Scientist at the Public Health Laboratories at Addenbrooke’s Hospital (Cambridge), developing real-time quantitative methods for routine viral diagnostics.

Andy then moved to Prof. Steve Oliver’s lab at the University of Manchester to study for his PhD, performing some of the first microarray experiments and comparative genomics analysis at an exciting time when whole-genome sequences of several species of filamentous fungi were completed. Six months of his studies were spent at a US biotech company in California (Genencor) studying the secretory pathway and identifying novel proteases.

Dr Sims continued his focus on gene expression profiling whilst developing his interest in Breast Cancer during subsequent postdoctoral research with Prof. Tony Howell at the Paterson Institute for Cancer Research at the Christie Hospital in Manchester. He conducted a range of translational gene expression profiling projects looking at how known risk factors and preventative interventions for breast cancer actually impart their effects on patients.

In June 2008, Andy relocated to the University of Edinburgh Cancer Research Centre to establish his own research group and provide bioinformatics input to ongoing collaborative multidisciplinary projects. His research interests cover a broad spectrum, but could be summed up simply as ‘trying to make sense of lots of data, to improve our understanding of cancer’. In 2013, Andy was promoted to a tenured Senior Research Fellow.

Responsibilities & affiliations

 

 

 

Open to PhD supervision enquiries?

Yes

Current PhD students supervised

Richard Bownes (with Olga Oikonomidou)

Nick Moir (with Ian simpson)

Laura Gomez Cuadrado (with Val Brunton)

Duniya Mosly (with Simon Langdon)

Maria Bonello (with Simon Langdon)

Giovanni Tramonti (with Peter Hall)

Past PhD students supervised

Dominic Pearce  (With Mike dixon) PhD

Ajit Nirmal (with Tom Freeman) PhD

Robb Hollis (with Charlie Gourley) PhD

Victoria Wilson (with Mike Dixon) MD

Laura Arthur (with Mike Dixon) MD

Matina Fragkogianni (with Jeff Pollard) PhD

Anas Saeed (with Victor Lopes) PhD

Arran Turnbull (with Mike Dixon) PhD 

Colette Meyer (with Simon Langdon) PhD

Robert Kitchen PhD

View all 98 publications on Research Explorer