School of Informatics

Data Science and Artificial Intelligence Publications

2024
Open Access
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Verifying properties of activities of daily living

Contreras, R., Smola, F., Zheng, J., Hillston, J. & Fleuriot, J. D., 7 Oct 2024, (Accepted/In press) Proceedings of the 12th International Symposium DataMod 2024: From Data to Models and Back. Springer, p. 1-18 18 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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SECRET: Statistical Emulation for Computational Reverse Engineering and Translation with applications in healthcare

Paun, L. M., Colebank, M. J., Taylor-LaPole, A., Olufsen, M. S., Ryan, W., Murray, I., Salter, J. M., Applebaum, V., Dunne, M., Hollins, J., Kimpton, L., Volodina, V., Xiong, X. & Husmeier, D., Oct 2024, In: Computer Methods in Applied Mechanics and Engineering. 430, p. 1-22 22 p., 117193.

Research output: Contribution to journalArticlepeer-review

Open Access
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Open Access
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Diffusion Models for Counterfactual Generation and Anomaly Detection in Brain Images

Fontanella, A., Mair, G., Wardlaw, J., Trucco, E. & Storkey, A., 13 Sept 2024, (E-pub ahead of print) In: IEEE Transactions on Medical Imaging. PP

Research output: Contribution to journalArticlepeer-review

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An extendable Python implementation of robust optimisation Monte Carlo

Gkolemis, V., Gutmann, M. & Pesonen, H., 29 Aug 2024, In: Journal of Statistical Software. 110, 2, p. 1-26 26 p.

Research output: Contribution to journalArticlepeer-review

Open Access
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Frailty or frailties: Exploring frailty index subdimensions in the English Longitudinal Study of Ageing

Johnson, L., Guthrie, B., Kelly, P. A. T., Anand, A., Marshall, A. & Seth, S., 25 Aug 2024, In: Journal of Epidemiology and Community Health. 78, 10, p. 609-615 7 p., e221829.

Research output: Contribution to journalArticlepeer-review

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Education challenges among early career researchers in Medical Informatics

Rohani, N., Gallagher, M., Gal, Y. K. & Manataki, A., 22 Aug 2024, Digital Health and Informatics Innovations for Sustainable Health Care Systems: Proceedings of MIE 2024. Mantas, J., Hasman, A., Demiris, G., Saranto, K., Marschollek, M., Arvanitis, T. N., Ognjanović, I., Benis, A., Gallos, P., Zoulias, E. & Andrikopoulou, E. (eds.). IOS Press, p. 1510 - 1514 (Studies in health technology and informatics; vol. 316).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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Self-reported learning strategies and preferences in health informatics

Rohani, N., Gallagher, M., Gal, K., Banas, K. & Manataki, A., 22 Aug 2024, Digital Health and Informatics Innovations for Sustainable Health Care Systems: Proceedings of MIE 2024. Mantas, J., Hasman, A., Demiris, G., Saranto, K., Marschollek, M., Arvanitis, T. N., Ognjanović, I., Benis, A., Gallos, P., Zoulias, E. & Andrikopoulou, E. (eds.). IOS Press, Vol. 316. p. 1540-1544 5 p. (Studies in Health Technology and Informatics; vol. 316).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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An algebraic framework for hierarchical probabilistic abstraction

Upreti, N. & Belle, V., 20 Aug 2024, (Accepted/In press) Proceedings of the 4th International Joint Conference on Learning and Reasoning. Springer, p. 1-17 17 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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MisCC: Misinformation detection on counterfactual claims

Li, X., Belle, V. & Ross, B., 20 Aug 2024, (Accepted/In press) Proceedings of the 4th International Joint Conference on Learning and Reasoning. Springer, p. 1-15 15 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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Multimorbidity and adverse outcomes following emergency department attendance: population based cohort study

Blayney, M. C., Reed, M. J., Masterson, J., Anand, A., Bouamrane, M-M., Fleuriot, J. D., Luz, S., Lyall, M., Mercer, S. W., Mills, N. L., Shenkin, S. D., Walsh, T. S., Wild, S. H., Wu, H., McLachlan, S., Guthrie, B. & Lone, N. I., 17 Aug 2024, In: BMJ Medicine. 3, 1, 14 p., e000731.

Research output: Contribution to journalArticlepeer-review

Open Access
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Phishing Codebook: A structured framework for the characterization of phishing emails

Saka, T., Jain, R., Vaniea, K. & Kokciyan, N., 16 Aug 2024, ArXiv, p. 1-18, 18 p.

Research output: Working paperPreprint

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Computational argumentation-based chatbots: A survey

Castagna, F., Kökciyan, N., Sassoon, I., Parsons, S. & Sklar, E., 2 Aug 2024, In: Journal of Artificial Intelligence Research. 80, p. 1271-1310 40 p.

Research output: Contribution to journalArticlepeer-review

Open Access
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A call for caution when using network methods to study multimorbidity: an illustration using data from the Canadian Longitudinal Study on Aging

Griffith, L. E., Brini, A., Muniz-Terrera, G., St. John, P. D., Stirland, L. E., Mayhew, A., Oyarzún, D. & van den Heuvel, E., Aug 2024, In: Journal of Clinical Epidemiology. 172, 11 p., 111435.

Research output: Contribution to journalArticlepeer-review

Open Access
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The Ontoverse: Democratising access to knowledge graph-based data through a cartographic interface

Zimmermann, J., Wiktorek, D., Meusburger, T., Monge-Dalmau, M., Fabregat, A., Jarasch, A., Schmidt, G., Reis-Filho, J. S. & Simpson, T. I., 22 Jul 2024, ArXiv, p. 1-14, 14 p.

Research output: Working paperPreprint

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Neurosymbolic AI for reasoning over knowledge graphs: A survey

DeLong, L. N., Mir, R. F. & Fleuriot, J. D., 18 Jul 2024, (E-pub ahead of print) In: IEEE Transactions on Neural Networks and Learning Systems. p. 1-21 21 p.

Research output: Contribution to journalReview articlepeer-review

Open Access
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Pre-processing and quality control of large clinical CT head datasets for intracranial arterial calcification segmentation

Jin, B., del C. Valdés Hernández, M., Fontanella, A., Li, W., Platt, E., Armitage, P., Storkey, A., Wardlaw, J. M. & Mair, G., 15 Jul 2024, (Accepted/In press) Data Engineering in Medical Imaging (DEMI). Springer, (Lecture Notes in Computer Science).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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Retrospective for the Dynamic Sensorium Competition for predicting large-scale mouse primary visual cortex activity from videos

Turishcheva, P., Fahey, P. G., Vystrčilová, M., Hansel, L., Froebe, R., Ponder, K., Qiu, Y., Willeke, K. F., Bashiri, M., Baikulov, R., Zhu, Y., Ma, L., Yu, S., Huang, T., Li, B. M., Wulf, W. D., Kudryashova, N., Hennig, M. H., Rochefort, N. L., Onken, A., & 5 othersWang, E., Ding, Z., Tolias, A. S., Sinz, F. H. & Ecker, A. S., 12 Jul 2024, ArXiv.

Research output: Working paperPreprint

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Answerable sociotechnical systems

Kekulluoglu, D., Rovatsos, M. & Kokciyan, N., 5 Jul 2024, (Accepted/In press) Proceedings of the 27th European Conference on Artificial Intelligence. IOS Press

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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Beyond the echo chamber: Modelling open-mindedness in citizens’ assemblies

Barrett, J., Gal, K., Michael, L. & Vilenchik, D., 3 Jul 2024, In: Autonomous Agents and Multi-Agent Systems. 38, 2, p. 1-41 41 p., 30.

Research output: Contribution to journalArticlepeer-review

Open Access
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Click to grasp: Zero-shot precise manipulation via visual diffusion descriptors

Tsagkas, N., Rome, J., Ramamoorthy, S., Mac Aodha, O. & Lu, X. C., 30 Jun 2024, (Accepted/In press) Proceedings of the 2024 IEEE/RSJ International Conference on Intelligent Robots and Systems.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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Improving variational autoencoder estimation from incomplete data with mixture variational families

Simkus, V. & Gutmann, M. U., 28 Jun 2024, In: Transactions on Machine Learning Research. p. 1-29 29 p.

Research output: Contribution to journalArticlepeer-review

Open Access
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Engineering conversational search systems: A review of applications, architectures, and functional components

Schneider, P., Poelman, W., Rovatsos, M. & Matthes, F., 24 Jun 2024, (Accepted/In press).

Research output: Contribution to conferencePaperpeer-review

Open Access
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Of mice and mates: Automated classification and modelling of mouse behaviour in groups using a single model across cages

Camilleri, M. P. J., Bains, R. S. & Williams, C. K. I., 17 Jun 2024, In: International Journal of Computer Vision. p. 1-23 23 p.

Research output: Contribution to journalArticlepeer-review

Open Access
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Connected Speech-Based Cognitive Assessment in Chinese and English

Luz, S., Garcia, S. D. L. F., Haider, F., Fromm, D., MacWhinney, B., Lanzi, A., Chang, Y-N., Chou, C-J. & Liu, Y-C., 11 Jun 2024, ArXiv, 5 p.

Research output: Working paperPreprint

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Can large language models put 2 and 2 together? Probing for entailed arithmetical relationships

Panas, D., Seth, S. & Belle, V., 7 Jun 2024, (Accepted/In press) Proceedings of the 18th International Conference for Neurosymbolic Learning and Reasoning. (Proceedings of the International Conference for Neurosymbolic Learning and Reasoning).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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Ethical reward machines

Ciupa, J. & Belle, V., 7 Jun 2024, (Accepted/In press) Proceedings of the 18th International Workshop on Neural-Symbolic Learning and Reasoning. (Proceedings of the International Conference for Neurosymbolic Learning and Reasoning).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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ToM-LM: Delegating theory of mind reasoning to external symbolic executors in large language models

Tang, W. & Belle, V., 7 Jun 2024, (Accepted/In press) Proceedings of the 18th International Conference for Neurosymbolic Learning and Reasoning. (Proceedings of the International Conference for Neurosymbolic Learning and Reasoning).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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Towards a lifelong personalized brain health program: empowering individuals to define, pursue, and monitor meaningful outcomes

Saunders, S., Gomes-Osman, J., Jannati, A., Ciesla, M., Banks, R., Showalter, J., Muniz-Terrera, G., Luz, S., Ritchie, C. & Pascual-Leone, Á., 5 Jun 2024, In: Frontiers in Neurology. 15, 7 p., 1387206.

Research output: Contribution to journalArticlepeer-review

Open Access
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The FRESHAIR4Life study: Global implementation research on non-communicable disease prevention targeting adolescents’ exposure to tobacco and air pollution in disadvantaged populations

Hoffman, C., Versluis, A., Chirila, S., Kirenga, B., Khan, A., Saeed, S., Sooronbaev, T., Tsiligianni, I., Arvind, D. K., Bauld, L., van den Brand, F. A., Chavannes, N., Pinnock, H., Powell, P., van der Schans, J., Siddiqi, K., Williams, S. & van der Kleij, R., 4 Jun 2024, In: npj Primary Care Respiratory Medicine. 34, 12 p., 14.

Research output: Contribution to journalArticlepeer-review

Open Access
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Prediction of retinopathy progression using deep learning on retinal images within the Scottish screening programme

Mellor, J., Jiang, W. J., Fleming, A., McGurnaghan, S., Blackbourn, L., Styles, C., Storkey, A. J., McKeigue, P. M. & Colhoun, H. M., 1 Jun 2024, In: British Journal of Ophthalmology. 108, 6, p. 833-839

Research output: Contribution to journalArticlepeer-review

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Guiding a language-model based protein design method towards MHC Class-I immune-visibility targets in vaccines and therapeutics

Gasser, H-C., Oyarzún, D. A., Rajan, A. & Alfaro, J. A., Jun 2024, In: ImmunoInformatics. 14, p. 1-14 14 p., 100035.

Research output: Contribution to journalArticlepeer-review

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Providing Insights into Health Data Science Education through Artificial Intelligence

Rohani, N., Gal, Y. K., Gallagher, M. & Manataki, A., 23 May 2024, (E-pub ahead of print) In: BMC Medical Education. 24, 564

Research output: Contribution to journalArticlepeer-review

Open Access
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Beyond jamming grippers: Granular material in robotics

Li, H., Sun, J. & Herrmann, J. M., 21 May 2024, (E-pub ahead of print) In: Advanced Robotics.

Research output: Contribution to journalLiterature reviewpeer-review

Open Access
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Highway graph to accelerate reinforcement learning

Yin, Z., Zhang, Z., Gong, D., Albrecht, S. V. & Shi, J. Q., 20 May 2024, ArXiv.

Research output: Working paperPreprint

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Linear resources in Isabelle/HOL

Smola, F. & Fleuriot, J. D., 18 May 2024, In: Journal of Automated Reasoning. 68, p. 1-49 49 p., 9.

Research output: Contribution to journalArticlepeer-review

Open Access
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Open Access
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Dam: Towards a foundation model for time series forecasting

Darlow, L., Deng, Q., Hassan, A., Asenov, M., Singh, R., Joosen, A., Barker, A. & Storkey, A., 9 May 2024.

Research output: Contribution to conferencePosterpeer-review

Open Access

Progression with probabilities in the Situation Calculus: Representation and succinctness

Liu, D. & Belle, V., 6 May 2024, Proceedings of the 23rd International Conference on Autonomous Agents and Multiagent Systems. ACM, p. 1210-1218 9 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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Semantic objective functions: A distribution-aware method for adding logical constraints in deep learning

Mendez-Lucero, M. A., Gallardo, E. B. & Belle, V., 3 May 2024, ArXiv.

Research output: Working paperPreprint

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Learning high-frequency functions made easy with sinusoidal positional encoding

Sun, C., Yuan, Z., Xu, K., Mai, L., N, S., Chen, S. & Marina, M. K., 1 May 2024, (Accepted/In press) Proceedings of the 41st International Conference on Machine Learning.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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Naive Bayes classifiers and one-hot encoding of categorical variables

Williams, C. K. I., 28 Apr 2024, ArXiv, p. 1-7, 7 p.

Research output: Working paperPreprint

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Enhancing volleyball training: empowering athletes and coaches through advanced sensing and analysis

Salim, F. A., Postma, D. B. W., Haider, F., Luz, S., Beijnum, B. J. F. V. & Reidsma, D., 16 Apr 2024, In: Frontiers in Sports and Active Living. 6, 1326807.

Research output: Contribution to journalArticlepeer-review

Open Access

Assessment of salivary cortisol dynamics in an infantry training exercise: a pilot study

Gifford, R. M., Taylor, N., Carroll, A., Sweeting, J., Parsons, I. T., Stacey, M. J., Homer, N. Z. M., Tsanas, A., Woods, D. R. & Reynolds, R. M., 11 Apr 2024, In: BMJ Military Health.

Research output: Contribution to journalArticlepeer-review

Open Access
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Using internal standards in time-resolved X-ray micro-computed tomography to quantify grain-scale developments in solid-state mineral reactions

Rizzo, R. E., Freitas, D., Gilgannon, J., Seth, S., Butler, I. B., Mcgill, G. E. & Fusseis, F., 9 Apr 2024, In: Solid Earth. 15, 4, p. 493-512

Research output: Contribution to journalArticlepeer-review

Open Access
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Learning explanatory logical rules in non-linear domains: a neuro-symbolic approach

Bueff, A. & Belle, V., 8 Apr 2024, (E-pub ahead of print) In: Machine Learning. 34 p.

Research output: Contribution to journalArticlepeer-review

Open Access
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Experiential AI: Between arts and explainable AI

Hemment, D., Murray-Rust, D., Belle, V., Aylett, R., Vidmar, M. & Broz, F., 2 Apr 2024, (E-pub ahead of print) In: Leonardo. 57, 3, p. 298-306 9 p.

Research output: Contribution to journalArticlepeer-review

Open Access
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Machine learning on cardiotocography data to classify fetal outcomes: A scoping review

Francis, F., Luz, S., Wu, H., Stock, S. J. & Townsend, R., 1 Apr 2024, In: Computers in Biology and Medicine. 172, 18 p., 108220.

Research output: Contribution to journalArticlepeer-review

Open Access
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