Row Fogo Centre for Research into Ageing and the Brain
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Software releases

View our recent software releases.

Brain arteries

Software developed within the Row Fogo Centre to facilitate neuroimaging analysis.

 

Ischaemic Stroke Lesions Segmentation using Convolutional Neural Networks 

Authors: Carlos Uziel Perez Malla MSc. work supervised by Maria del C. Valdés Hernandez and Taku Komura

GitHub link (external website)

 

Limited-One Time Sample-Irregularity Age Map for GPU (LOTS-IAM GPU)

Authors: Febrian Rachmadi, Maria del C. Valdés Hernandez and Taku Komura

GitHub link (external website)

 

Dilated Saliency UNet

Authors: Yunhee Jeong MSc work supervised by M. Febrian Rachmadi, Maria del C. Valdés Hernández and Taku Komura

GitHub link (external website)

 

Dynamic Brain MRI Analysis 

Authors: José Bernal Moyano and Maria del C. Valdés Hernández

GitHub link (external website)

 

Functions for processing DCE-MRI data and performing simulations

Author: Dr Michael Thrippleton

GitHub link (external website)

 

Fit T2 or T2 Star MRI data and create parameters maps

Dr Michael Thrippleton

GitHub link (external website)

 

Functions for processing MT Saturation images

Author: Dr Michael Thrippleton

GitHub link (external website)  

 

Process T1 mapping using DESPOT1-HIFI or Variable Flip Angle methods

Author: Dr Michael Thrippleton

GitHub link (external website)   

 

T1 mapping using IRSE method

Author: Dr Michael Thrippleton

GitHub link (external website)  

 

See also

Row Fogo Centre - Our research 

Row Fogo Centre Small Vessel Disease Research- Edinburgh Research Explorer (external link for open access research outputs and information about projects)